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PDBsum entry 3l2p

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Protein chain A PDB id
3l2p
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
4 sheets
7 beta hairpins
1 psi loop
7 beta bulges
18 strands
24 helices
26 helix-helix interacs
41 beta turns
13 gamma turns
PROSITE
DNA_LIGASE_A2
DNA_LIGASE_A1
  
Chain (535 residues)

UniProt code: P49916 (DNLI3_HUMAN)   [Pfam]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 Unassigned = - -
2 3.30.1490.70 = Alpha Beta 2-Layer Sandwich
3 3.30.470.30 = Alpha Beta 2-Layer Sandwich
4 2.40.50.140 = Mainly Beta Beta Barrel

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to ligand     to DNA/RNA
PDB SITE records:   
 AC1
PROSITE patterns:   
Low   High conservation

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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