PDBsum entry 3l2k Go to PDB code:  Tunnel analysis for: 3l2k calculated with MOLE 2.0 PDB id 3l2k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 4.19 41.6 2.12 0.57 2.7 87 1 1 2 15 0 1 0   2 1.18 3.68 45.7 1.83 0.52 5.2 82 2 1 2 15 0 2 0   3 1.17 1.36 39.6 0.43 0.23 9.6 79 3 2 0 8 2 3 0   4 1.17 1.35 44.5 0.25 0.11 9.7 81 5 0 1 8 2 2 0   5 1.15 1.73 17.5 0.18 -0.16 4.8 90 0 1 3 5 0 0 0   6 1.15 1.16 19.8 0.37 -0.09 4.5 86 0 1 4 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.