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PDBsum entry 3kv6

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3kv6 calculated with MOLE 2.0 PDB id
3kv6
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 2.05 30.4 0.75 0.66 8.6 80 2 1 1 5 4 0 0  AKG 702 A
2 1.24 2.43 33.3 -0.36 0.09 19.5 79 2 2 2 5 4 1 0  FE2 491 D OXY 492 D AKG 701 D
3 1.26 2.71 33.6 -0.24 0.03 18.9 79 2 3 1 6 4 0 0  FE2 491 D OXY 492 D AKG 701 D
4 1.24 2.51 34.3 -0.03 0.09 14.9 78 2 2 1 6 4 0 0  FE2 491 D OXY 492 D AKG 701 D
5 1.84 2.00 17.8 -1.73 -0.10 19.9 79 3 2 0 2 1 1 0  
6 1.39 2.76 23.5 0.28 -0.04 8.7 75 2 2 2 5 3 1 0  
7 1.39 2.01 25.0 0.44 0.02 8.1 79 2 2 2 5 2 1 0  
8 1.41 1.75 16.4 -1.11 -0.14 8.9 67 1 1 2 5 2 0 0  
9 1.21 1.94 15.4 -2.01 -0.38 29.0 67 2 3 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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