 |
PDBsum entry 3ktq
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3ktq calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3ktq
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
3 pores,
coloured by radius |
|
4 pores,
coloured by radius
|
4 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.69 |
3.91 |
25.9 |
-1.28 |
-0.54 |
20.6 |
88 |
|
3 |
3 |
2 |
4 |
1 |
0 |
0 |
|
DC 109 B DG 110 B DA 203 C DG 204 C
|
 |
|
2 |
 |
3.70 |
4.90 |
30.4 |
-1.68 |
-0.66 |
25.8 |
87 |
3 |
3 |
1 |
3 |
1 |
0 |
0 |
DC 109 B DG 110 B DG 205 C DG 206 C DC 207 C DG
208 C
|
|
3 |
 |
2.22 |
2.28 |
49.5 |
-2.27 |
-0.64 |
28.7 |
86 |
6 |
4 |
2 |
1 |
1 |
0 |
0 |
DCT 113 A MG 901 A DC 109 B DG 110 B DC 111 B DOC
112 B DG 204 C DG 205 C DG 206 C DC 207 C DG 208 C
|
 |
4 |
 |
0.96 |
0.97 |
39.1 |
-2.00 |
-0.76 |
19.0 |
86 |
4 |
3 |
2 |
0 |
0 |
1 |
0 |
DA 105 B DC 106 B DG 107 B DG 108 B DC 210 C DG
211 C DT 212 C DG 213 C DG 214 C
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program