PDBsum entry 3kps Go to PDB code:  Tunnel analysis for: 3kps calculated with MOLE 2.0 PDB id 3kps Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.34 20.6 -1.24 -0.11 15.0 76 3 2 2 2 2 0 0   2 1.24 1.35 31.7 -0.55 -0.04 10.0 73 2 3 3 3 5 1 0   3 1.39 1.57 25.2 -0.54 0.15 13.9 65 3 1 0 5 6 1 0   4 1.63 1.63 15.4 -1.43 -0.47 16.6 86 2 1 3 1 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.