spacer
spacer

PDBsum entry 3koi

Go to PDB code: 
Top Page protein metals tunnels links
Tunnel analysis for: 3koi calculated with MOLE 2.0 PDB id
3koi
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.37 11.9 -1.39 -0.31 16.2 72 2 0 0 1 1 1 0  
2 1.40 13.9 -1.64 -0.35 18.8 75 2 0 0 1 1 0 0  
3 1.26 10.2 3.86 1.14 0.1 61 0 0 0 6 0 0 0  
4 2.19 6.6 -1.73 -0.48 25.3 71 2 1 0 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer