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PDBsum entry 3kk3

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Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3kk3 calculated with MOLE 2.0 PDB id
3kk3
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.84 1.84 46.4 -1.73 -0.66 24.0 80 4 2 0 1 0 0 0  DC 809 P DT 810 P DT 812 P DT 813 P DC 814 P DG
710 T DC 712 T DC 713 T DG 714 T DA 715 T DA 716
T DA 718 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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