PDBsum entry 3kk1 Go to PDB code:  Tunnel analysis for: 3kk1 calculated with MOLE 2.0 PDB id 3kk1 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.33 114.1 -0.61 -0.32 12.4 80 8 4 4 8 3 3 0  914 825 A SO4 2 P DT 813 P DC 814 P DG 815 P DG 816 P DG 817 P DC 818 P DG 819 P DC 820 P DC 821 P DOC 822 P DT 705 T DG 706 T DG 707 T DG 708 T DC 709 T DG 710 T DC 711 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.