PDBsum entry 3khr Go to PDB code:  Pore analysis for: 3khr calculated with MOLE 2.0 PDB id 3khr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.95 1.95 32.2 -0.36 0.28 23.3 93 5 0 2 3 0 0 0  DG 806 D DA 807 D DT 808 D DG 809 D DG 810 D DT 811 D DC 814 D DA 903 E DA 904 E DC 905 E DG 906 E DC 907 E DC 910 E AF 926 E 2 1.87 1.87 39.4 -1.55 -0.35 19.7 80 3 2 2 2 2 0 0  TTP 414 A DC 814 D DDG 815 D DA 903 E DA 904 E DC 905 E DG 906 E DC 907 E 3 2.71 3.52 43.1 -2.22 -0.41 28.6 78 7 5 1 2 2 0 0  TTP 414 A CA 415 A CA 417 A DC 814 D DDG 815 D DG 906 E DC 907 E 4 2.49 2.55 53.4 -1.81 -0.51 23.1 79 6 5 1 2 3 0 0  TTP 414 A CA 415 A CA 417 A DG 806 D DG 813 D DC 814 D DDG 815 D DG 906 E DT 908 E DA 909 E DC 910 E 5 2.63 2.64 64.3 -2.06 -0.57 21.8 77 7 3 2 1 3 0 0  DG 806 D DG 813 D DC 814 D DG 906 E DC 907 E DT 908 E DA 909 E DC 910 E 6 1.90 1.90 94.4 -1.22 -0.70 15.3 82 7 5 1 2 1 0 0  TTP 414 A CA 415 A CA 417 A DG 806 D DA 807 D DT 808 D DG 809 D DG 810 D DT 811 D DA 812 D DG 813 D DC 814 D DDG 815 D DG 906 E DT 908 E DA 909 E DC 910 E DC 911 E DA 912 E DT 913 E DC 914 E DC 915 E DA 916 E DA 917 E 7 1.93 1.93 94.0 -1.09 -0.71 12.2 70 5 2 0 0 2 0 0  DG 806 D DA 807 D DT 808 D DG 809 D DG 810 D DT 811 D DA 812 D DA 909 E DC 910 E DC 911 E DA 912 E DT 913 E DC 914 E DC 915 E DA 916 E DA 917 E 8 2.59 2.64 52.0 -1.68 -0.52 20.9 82 6 4 1 4 2 1 0  TTP 1414 B CA 1417 B DG 1806 H DA 1807 H DG 1813 H DC 1814 H DDG 1815 H DG 1906 J DT 1908 J DA 1909 J DC 1910 J 9 2.10 2.26 53.5 -1.81 -0.44 21.5 80 7 2 0 3 2 1 0  DG 1806 H DA 1807 H DG 1813 H DC 1814 H DC 1907 J DT 1908 J DA 1909 J DC 1910 J 10 1.84 1.84 63.0 -1.22 -0.63 13.4 69 4 2 0 0 2 1 0  DG 1806 H DA 1807 H DT 1808 H DG 1809 H DG 1810 H DT 1811 H DA 1812 H DA 1909 J DC 1910 J DC 1911 J DA 1912 J DT 1913 J DC 1914 J DC 1915 J 11 1.85 1.85 69.0 -1.49 -0.63 18.1 84 7 2 0 3 0 1 0  DT 1808 H DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H DC 1814 H DC 1907 J DT 1908 J DA 1909 J DC 1910 J DC 1911 J DA 1912 J DT 1913 J DC 1914 J DC 1915 J 12 2.41 2.41 69.8 -0.36 -0.41 8.9 81 2 3 1 3 0 1 0  DT 1808 H DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H DC 1814 H DA 1912 J DT 1913 J DC 1914 J DC 1915 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.