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PDBsum entry 3khr
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Tunnel analysis for: 3khr calculated with  MOLE 2.0
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PDB id
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3khr
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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11 tunnels,
coloured by
tunnel radius
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11 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.23 |
18.8 |
-0.37 |
-0.04 |
17.0 |
97 |
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2 |
0 |
1 |
3 |
0 |
0 |
0 |
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DC 814 D DA 904 E DC 905 E DG 906 E DC 907 E AF
926 E
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2 |
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1.11 |
1.11 |
19.5 |
-2.46 |
-0.38 |
31.9 |
92 |
4 |
0 |
2 |
0 |
0 |
0 |
0 |
DG 806 D DA 807 D DT 808 D DG 809 D DG 810 D DC
910 E
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3 |
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1.24 |
1.24 |
21.1 |
0.09 |
0.15 |
16.2 |
100 |
1 |
0 |
1 |
3 |
0 |
0 |
0 |
DT 811 D DA 812 D DG 906 E DC 907 E AF 926 E
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4 |
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1.11 |
1.11 |
21.2 |
-0.49 |
0.08 |
20.3 |
98 |
2 |
0 |
1 |
2 |
0 |
0 |
0 |
DG 809 D DG 810 D DT 811 D DA 812 D DC 907 E AF
926 E
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5 |
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1.11 |
1.11 |
23.3 |
0.01 |
0.26 |
18.8 |
96 |
3 |
0 |
1 |
3 |
0 |
0 |
0 |
DG 809 D DG 810 D DT 811 D DC 814 D DA 904 E DC
905 E DG 906 E DC 907 E AF 926 E
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6 |
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1.11 |
1.11 |
25.0 |
-0.62 |
-0.28 |
15.8 |
96 |
2 |
1 |
1 |
2 |
0 |
0 |
0 |
DG 809 D DG 810 D DT 811 D
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7 |
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1.24 |
1.23 |
29.8 |
-0.06 |
-0.11 |
13.6 |
101 |
1 |
1 |
2 |
3 |
0 |
0 |
0 |
DG 810 D DT 811 D DG 906 E DC 907 E AF 926 E
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8 |
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1.22 |
1.22 |
35.1 |
-1.20 |
-0.19 |
23.1 |
97 |
4 |
0 |
3 |
3 |
0 |
0 |
0 |
DG 806 D DA 807 D DT 808 D DG 809 D DG 810 D DT
811 D DG 906 E DC 907 E DC 910 E AF 926 E
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9 |
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1.50 |
1.49 |
25.9 |
0.91 |
0.34 |
10.7 |
94 |
3 |
0 |
2 |
6 |
0 |
1 |
0 |
DG 1813 H DC 1814 H DA 1904 J DC 1905 J DG 1906 J
DC 1907 J AF 1926 J
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10 |
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1.46 |
1.46 |
34.0 |
-1.39 |
-0.24 |
24.2 |
97 |
5 |
0 |
3 |
4 |
0 |
1 |
0 |
DG 1806 H DA 1807 H DT 1808 H DG 1809 H DG 1810 H
DT 1811 H DG 1906 J DC 1907 J DC 1910 J AF 1926 J
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11 |
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1.24 |
1.24 |
39.6 |
-0.95 |
-0.21 |
19.9 |
98 |
5 |
0 |
2 |
4 |
0 |
2 |
0 |
DT 1808 H DG 1809 H DG 1810 H DT 1811 H DG 1906 J
DC 1907 J DC 1915 J AF 1926 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program