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PDBsum entry 3kgr

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Immune system PDB id
3kgr
Contents
Protein chain
99 a.a.
Ligands
GLY
GOL
Waters ×443

References listed in PDB file
Key reference
Title Crystal structure and collagen-Binding site of immune inhibitory receptor lair-1: unexpected implications for collagen binding by platelet receptor gpvi.
Authors T.H.Brondijk, T.De ruiter, J.Ballering, H.Wienk, R.J.Lebbink, H.Van ingen, R.Boelens, R.W.Farndale, L.Meyaard, E.G.Huizinga.
Ref. Blood, 2010, 115, 1364-1373.
PubMed id 20007810
Abstract
Leukocyte-associated immunoglobulin-like receptor-1 (LAIR-1), one of the most widely spread immune receptors, attenuates immune cell activation when bound to specific sites in collagen. The collagen-binding domain of LAIR-1 is homologous to that of glycoprotein VI (GPVI), a collagen receptor crucial for platelet activation. Because LAIR-1 and GPVI also display overlapping collagen-binding specificities, a common structural basis for collagen recognition would appear likely. Therefore, it is crucial to gain insight into the molecular interaction of both receptors with their ligand to prevent unwanted cross-reactions during therapeutic intervention. We determined the crystal structure of LAIR-1 and mapped its collagen-binding site by nuclear magnetic resonance (NMR) titrations and mutagenesis. Our data identify R59, E61, and W109 as key residues for collagen interaction. These residues are strictly conserved in LAIR-1 and GPVI alike; however, they are located outside the previously proposed GPVI collagen-binding site. Our data provide evidence for an unanticipated mechanism of collagen recognition common to LAIR-1 and GPVI. This fundamental insight will contribute to the exploration of specific means of intervention in collagen-induced signaling in immunity and hemostasis.
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