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Ligand clusters for UniProt code Q8A1G3

Ligand clusters for Q8A1G3: Alpha-amylase, susG OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=susG PE=1 SV=1

Top 6 (of 12) ligand clusters
Cluster 1.
7 ligand types
11 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3k8kA  
 

Structures

PDB   Schematic diagram
3k8kA    
3k8mA    
3k8lA    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: ACT × 3
acetic acid
Acetate ion
PDB codes: 3k8k(A),


 
2. Ligand: ACR × 1
acarbose
Alpha-Acarbose
PDB code: 3k8m(A).


 
3. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 3k8k(A), 3k8l(A).


 
4. Ligand: 3SA × 1
Acarbose derived trisaccharide
PDB code: 3k8m(A).


 
5. Ligand: CEY × 1
Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-Glucopyranosyl- (1->4)-Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-
Glucopyranosyl-(1->4)-Alpha-D-Glucopyranosyl-(1->4)- Alpha-D-Glucopyranose
PDB code: 3k8l(A).


 
6. Ligand: MAL × 1
Maltose
PDB code: 3k8m(A).


 
7. Ligand: MT7 × 1
Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-Glucopyranosyl- (1->4)-Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-
Glucopyranosyl-(1->4)-Alpha-D-Glucopyranosyl-(1->4)- Alpha-D-Glucopyranosyl-(1->4)-Beta-D-
Glucopyranose
PDB code: 3k8l(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: ACR × 1
acarbose
Alpha-Acarbose
PDB code: 3k8m(A).


 
2. Ligand: CEX × 1
Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-Glucopyranosyl- (1->4)-Alpha-D-Glucopyranosyl-(1->4)-Alpha-D-
Glucopyranosyl-(1->4)-Alpha-D-Glucopyranose
PDB code: 3k8l(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3k8k(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3k8k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3k8k(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 3k8k(A), 3k8l(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 3k8k(A), 3k8m(A).

 

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