PDBsum entry 3k5k Go to PDB code:  Pore analysis for: 3k5k calculated with MOLE 2.0 PDB id 3k5k Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.59 97.5 -1.19 -0.40 21.2 78 8 9 7 7 0 2 0   2 1.73 1.73 101.3 -1.52 -0.31 24.2 82 6 4 5 2 1 0 1  CL 3004 A 3 1.39 2.38 164.5 -2.22 -0.56 26.3 86 12 8 13 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.