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PDBsum entry 3k4x
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Pore analysis for: 3k4x calculated with  MOLE 2.0
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PDB id
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3k4x
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
1.53 |
31.3 |
-1.65 |
-0.77 |
17.1 |
102 |
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2 |
1 |
4 |
0 |
0 |
0 |
0 |
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DC 6 B DG 7 B DT 6 C DA 7 C DT 11 C DG 12 C
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2 |
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1.45 |
1.48 |
33.9 |
-2.19 |
-0.68 |
22.4 |
87 |
3 |
2 |
1 |
0 |
0 |
0 |
0 |
DC 3 B DA 4 B DT 5 B DC 6 B DT 6 C DA 7 C DC 8 C
DG 13 C DG 14 C
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3 |
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2.07 |
2.07 |
35.5 |
-1.17 |
-0.84 |
9.8 |
96 |
0 |
4 |
2 |
0 |
0 |
0 |
0 |
DC 3 B DA 4 B DT 5 B DC 6 B DG 7 B DT 11 C DG 12
C DG 13 C DG 14 C
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4 |
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1.45 |
1.50 |
45.9 |
-1.90 |
-0.71 |
19.2 |
88 |
3 |
3 |
1 |
0 |
0 |
0 |
0 |
DC 2 B DC 3 B DA 4 B DT 5 B DC 6 B DT 6 C DA 7 C
DC 8 C DG 13 C DG 14 C
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5 |
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1.74 |
1.81 |
50.1 |
-2.91 |
-0.66 |
32.2 |
85 |
7 |
4 |
2 |
0 |
0 |
0 |
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DG 7 B DT 8 B DA 9 B DT 10 B DT 6 C DA 7 C
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6 |
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1.40 |
1.48 |
63.0 |
-1.98 |
-0.77 |
20.9 |
92 |
7 |
5 |
6 |
0 |
0 |
0 |
0 |
DC 6 B DG 7 B DT 8 B DA 9 B DT 10 B DT 6 C DT 11
C DG 12 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program