PDBsum entry 3jyf Go to PDB code:  Pore analysis for: 3jyf calculated with MOLE 2.0 PDB id 3jyf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.09 2.11 38.8 -1.37 -0.16 17.4 74 5 1 1 2 3 2 0  MSE 275 A GOL 350 A 2 1.37 1.67 29.5 -0.88 -0.04 15.8 75 2 3 2 4 5 1 0  MSE 21 B MSE 22 B 3 1.21 1.30 38.5 0.48 0.21 3.6 66 0 1 2 7 7 1 0  MSE 21 B MSE 22 B MSE 89 B 4 1.22 1.30 43.3 0.87 0.28 8.6 73 2 2 0 10 5 0 0  MSE 21 B MSE 22 B MSE 89 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.