PDBsum entry 3jro Go to PDB code:  Pore analysis for: 3jro calculated with MOLE 2.0 PDB id 3jro Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.20 50.9 -0.83 -0.22 19.0 86 8 4 4 11 1 0 0  MSE 1513 A 2 1.37 1.75 85.5 -1.01 -0.38 19.8 82 8 11 8 11 4 0 0   3 1.34 1.51 102.0 -0.79 -0.16 16.1 82 7 5 4 7 4 2 0   4 1.19 1.34 108.1 -0.26 0.17 13.5 80 8 5 4 14 4 2 0  MSE 1513 A 5 1.28 1.62 135.6 -0.57 -0.16 12.4 80 7 8 7 16 7 4 0   6 1.47 1.76 154.7 -1.44 -0.51 19.6 84 11 16 15 14 4 1 1  MSE 1225 A 7 1.23 2.44 158.5 -0.46 -0.01 14.2 81 7 8 6 12 5 2 1  MSE 94 C 8 1.70 2.65 190.5 -1.61 -0.54 23.8 83 16 23 16 11 4 1 1  MSE 1225 A 9 1.26 1.29 197.0 -1.42 -0.42 20.1 83 17 20 15 18 4 4 1  MSE 1225 A MSE 1513 A 10 1.17 2.98 239.1 -1.45 -0.42 18.6 82 15 19 16 14 7 5 1  MSE 1225 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.