PDBsum entry 3jrm Go to PDB code:  Pore analysis for: 3jrm calculated with MOLE 2.0 PDB id 3jrm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.83 4.70 28.6 -2.51 -0.63 34.3 86 5 2 0 1 0 0 0   2 1.32 2.93 29.8 -1.74 -0.36 21.7 91 5 2 5 4 0 0 0   3 1.24 1.47 56.0 -2.92 -0.70 39.5 80 12 10 2 1 1 0 0   4 1.76 2.83 63.9 -1.09 -0.24 18.3 89 6 3 6 6 0 0 0   5 1.34 2.96 65.6 -2.26 -0.62 26.8 89 8 6 7 4 0 0 0   6 1.70 1.81 80.1 0.01 -0.27 9.8 89 4 6 5 13 0 1 0   7 1.48 1.63 88.6 -1.97 -0.41 22.0 83 8 5 8 5 2 1 0   8 1.29 3.19 89.9 -2.23 -0.50 26.8 84 12 8 5 5 2 0 0   9 1.12 1.12 90.2 -1.50 -0.40 23.3 81 10 10 2 3 2 0 0   10 1.51 1.50 93.4 -1.23 -0.19 18.2 82 7 5 5 6 1 0 0   11 1.76 2.31 99.5 -1.44 -0.33 18.8 86 11 5 8 6 2 1 0   12 1.80 2.92 103.6 -1.54 -0.34 19.6 84 10 5 6 5 2 0 0   13 1.04 1.04 105.4 -1.64 -0.49 23.6 81 15 11 5 4 3 0 0   14 1.84 1.89 116.4 -1.79 -0.46 23.3 88 10 9 7 6 0 1 0   15 1.75 1.86 126.1 -0.07 -0.21 10.9 89 5 7 8 18 0 2 0   16 1.28 2.96 147.6 -2.60 -0.68 32.2 86 16 14 9 4 1 0 0   17 1.62 1.77 146.1 -2.00 -0.48 22.5 84 13 7 10 7 2 1 0   18 1.30 3.15 154.1 -2.42 -0.61 29.1 88 18 12 12 7 0 0 0   19 1.66 4.60 151.9 -2.76 -0.71 35.6 83 18 17 4 1 1 0 0   20 1.70 1.81 154.2 0.03 -0.16 10.1 89 5 8 10 22 0 2 0   21 1.81 1.87 156.7 -0.07 -0.18 11.1 88 5 8 10 22 0 3 0   22 1.85 1.98 163.4 -1.84 -0.41 21.0 84 16 7 10 6 3 1 0   23 1.68 1.68 188.1 -0.12 -0.19 11.0 87 8 9 10 23 0 2 0   24 1.32 3.05 201.3 -2.62 -0.69 32.2 86 24 20 10 4 0 0 0   25 1.60 1.60 198.6 -0.11 -0.14 11.6 88 9 9 11 24 0 1 0   26 1.72 1.81 202.6 -0.72 -0.31 14.4 87 10 11 15 22 2 2 0   27 1.59 1.56 230.4 -0.15 -0.17 11.5 87 9 10 13 28 0 3 0   28 1.78 1.91 233.7 -0.72 -0.28 15.7 86 14 13 14 26 2 3 0   29 1.53 1.52 247.0 -0.78 -0.29 15.0 87 14 12 16 24 1 1 0   30 1.77 1.91 258.9 -0.83 -0.30 15.3 87 17 13 14 22 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.