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PDBsum entry 3jpr
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Tunnel analysis for: 3jpr calculated with  MOLE 2.0
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PDB id
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3jpr
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.20 |
30.3 |
-1.86 |
-0.14 |
21.7 |
79 |
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2 |
2 |
3 |
1 |
2 |
1 |
0 |
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G2M 338 A DG 7 P DC 8 P DG 9 P DOC 10 P DC 6 T DG
7 T DC 8 T
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2 |
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1.19 |
1.19 |
32.0 |
-1.57 |
-0.06 |
21.2 |
81 |
2 |
2 |
2 |
1 |
2 |
0 |
0 |
G2M 338 A DT 6 P DG 7 P DC 8 P DG 9 P DOC 10 P DC
6 T DG 7 T DC 8 T
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3 |
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1.18 |
1.19 |
35.9 |
-2.57 |
-0.59 |
26.6 |
83 |
3 |
6 |
3 |
0 |
2 |
0 |
0 |
G2M 338 A NA 340 A DG 9 P DOC 10 P DC 6 T DG 7 T
DC 8 T
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4 |
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1.18 |
1.19 |
54.4 |
-2.23 |
-0.36 |
24.8 |
80 |
6 |
3 |
3 |
1 |
2 |
1 |
0 |
G2M 338 A DC 3 D DG 4 D DG 9 P DOC 10 P DA 4 T DC
5 T DC 6 T DG 7 T DC 8 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program