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PDBsum entry 3jcm
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Transcription
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PDB id
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3jcm
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Contents |
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2174 a.a.
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429 a.a.
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416 a.a.
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734 a.a.
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279 a.a.
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139 a.a.
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126 a.a.
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843 a.a.
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1686 a.a.
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79 a.a.
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73 a.a.
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77 a.a.
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90 a.a.
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72 a.a.
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70 a.a.
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70 a.a.
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71 a.a.
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65 a.a.
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92 a.a.
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77 a.a.
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74 a.a.
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77 a.a.
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66 a.a.
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77 a.a.
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Generate full PROCHECK analyses
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PROCHECK summary for 3jcm
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 6742 89.7%*
Additional allowed regions [a,b,l,p] 656 8.7%
Generously allowed regions [~a,~b,~l,~p] 74 1.0%
Disallowed regions [XX] 44 0.6%*
---- ------
Non-glycine and non-proline residues 7516 100.0%
End-residues (excl. Gly and Pro) 161
Glycine residues 396
Proline residues 343
----
Total number of residues 8416
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.22
Chi1-chi2 distribution -0.45
Chi1 only 0.07
Chi3 & chi4 0.38
Omega -0.67*
-0.36
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.38
Main-chain bond angles 0.28
0.32
=====
OVERALL AVERAGE -0.06
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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