PDBsum entry 3jc7 Go to PDB code:  Pore analysis for: 3jc7 calculated with MOLE 2.0 PDB id 3jc7 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 2.00 44.9 -2.31 -0.52 32.5 81 9 5 2 0 1 0 0   2 1.91 3.43 86.2 -0.70 -0.36 12.9 91 7 3 7 6 2 0 0   3 2.25 2.09 124.1 -1.25 -0.35 16.8 83 8 6 11 9 2 5 0   4 2.33 2.49 127.9 -1.78 -0.40 19.7 82 12 5 9 7 2 3 0   5 1.66 1.72 133.9 -0.66 -0.27 15.6 84 8 6 4 12 1 2 0   6 2.09 2.34 143.7 -1.44 -0.33 17.2 82 12 7 11 7 3 5 0   7 2.77 3.66 148.9 -1.72 -0.31 20.4 81 12 10 12 10 4 4 0   8 1.36 1.67 161.9 -1.26 -0.24 21.5 82 20 6 10 17 3 2 0   9 1.92 2.68 162.7 -1.53 -0.28 21.3 81 14 8 8 10 3 3 0   10 1.32 1.34 166.8 -2.00 -0.56 23.0 87 12 11 8 4 2 0 0   11 1.61 1.87 188.5 -1.01 -0.15 15.2 83 14 8 12 17 6 3 0   12 1.51 2.18 194.1 -1.72 -0.42 23.3 85 18 13 12 6 2 1 0   13 1.31 1.57 191.6 -1.70 -0.40 24.7 87 19 15 15 9 3 2 0   14 1.69 1.81 221.4 -1.67 -0.35 21.4 83 16 11 13 10 4 5 0   15 1.36 1.39 223.7 -1.02 -0.30 18.2 82 21 12 14 21 5 1 0   16 2.24 2.26 228.0 -1.51 -0.42 20.9 83 19 14 14 8 3 5 0   17 2.31 2.48 233.1 -1.70 -0.41 23.1 82 19 17 15 12 4 4 0   18 1.16 2.35 237.0 -1.28 -0.30 16.4 88 21 4 17 18 4 2 0   19 1.38 1.76 238.6 -1.59 -0.31 22.0 85 24 7 13 15 1 2 0   20 1.28 2.03 252.5 -0.80 -0.22 12.1 82 18 8 24 23 6 4 2   21 1.75 2.00 257.8 -0.24 -0.11 12.8 82 20 8 14 28 5 4 0   22 1.84 2.72 258.3 -1.14 -0.24 19.2 82 21 17 16 21 8 2 0   23 1.31 1.30 260.4 -1.08 -0.21 14.8 82 20 8 28 26 7 4 2   24 2.03 5.70 265.5 -0.43 -0.14 14.7 82 24 7 12 24 3 4 0   25 1.95 3.04 287.8 -0.83 -0.27 16.9 81 24 14 15 26 6 3 0   26 1.30 2.19 293.0 -1.09 -0.21 17.6 84 22 15 20 26 4 2 2   27 1.31 1.42 298.8 -1.29 -0.28 15.9 82 23 11 28 23 8 4 2   28 1.32 2.23 291.8 -0.80 -0.14 15.7 83 19 15 23 29 6 3 2   29 1.31 2.32 300.7 -1.00 -0.27 15.0 84 14 14 22 24 3 6 2   30 1.28 1.39 332.2 -1.66 -0.39 20.2 83 25 27 24 19 6 4 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.