PDBsum entry 3j1s Go to PDB code:  Pore analysis for: 3j1s calculated with MOLE 2.0 PDB id 3j1s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 1.56 36.7 -0.74 -0.23 14.7 73 3 1 2 3 4 3 0   2 3.55 4.77 37.7 -0.33 0.07 7.3 78 2 0 4 6 2 1 0   3 1.55 1.58 38.8 -0.45 -0.18 10.7 71 3 1 1 4 4 4 0   4 2.50 4.00 44.2 -0.65 -0.02 5.8 82 2 1 7 6 2 1 0   5 2.71 2.70 72.5 -2.15 -0.52 15.7 79 5 4 7 2 3 4 0   6 1.88 3.87 73.3 -1.81 -0.39 13.7 77 5 3 7 3 6 3 0   7 1.33 1.57 32.1 -1.17 -0.41 19.6 82 3 2 2 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.