PDBsum entry 3itc Go to PDB code:  Tunnel analysis for: 3itc calculated with MOLE 2.0 PDB id 3itc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 2.32 19.4 -1.72 -0.11 26.9 89 6 2 1 1 1 0 0  CIT 503 A GOL 504 A 2 1.23 2.20 22.3 -0.90 0.09 13.6 78 4 2 2 3 3 1 0  CIT 503 A GOL 504 A 3 1.24 2.20 27.7 -2.18 -0.23 27.2 85 5 3 2 2 2 0 0  CIT 503 A GOL 504 A 4 1.23 2.23 31.1 -2.08 -0.19 26.9 85 5 3 2 2 2 0 0  CIT 503 A GOL 504 A 5 1.23 2.34 33.2 -1.16 -0.05 20.7 82 5 2 1 4 2 2 0  CIT 503 A GOL 504 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.