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PDBsum entry 3ir7

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Top Page protein ligands metals Protein-protein interface(s) links
Protein chain A PDB id
3ir7
Protein chain A highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
11 sheets
6 beta alpha beta units
13 beta hairpins
4 psi loops
10 beta bulges
40 strands
61 helices
69 helix-helix interacs
111 beta turns
18 gamma turns
Catalytic residues
C213
D222
PROSITE
MOLYBDOPTER
IN_PROK_2
MOLYBDOPTER
IN_PROK_1
MOLYBDOPTER
IN_PROK_3
Chain 1242 a.a.
Chain 509 a.a.
Chain 225 a.a.
  
Chain (1242 residues)

UniProt code: P09152 (NARG_ECOLI)   [Pfam]

structural classification (13 domains) :
Domain Links CATH no.   Class Architecture
1 4.10.1200.10 = Few Secondary Structures Irregular
2 Unassigned = - -
3 2.20.25.90 = Mainly Beta Single Sheet
4 Unassigned = - -
5 3.40.50.740 = Alpha Beta 3-Layer(aba) Sandwich
6 Unassigned = - -
7 3.40.228.10 = Alpha Beta 3-Layer(aba) Sandwich
8 Unassigned = - -
9 Unassigned = - -
10 Unassigned = - -
11 Unassigned = - -
12 Unassigned = - -
13 2.40.40.20 = Mainly Beta Beta Barrel

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Residue contacts:   
    to ligand     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2
PROSITE patterns:   
Low   High conservation

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


Domain 5
Topology diagram


Hera


Domain 6
Topology diagram


Hera


Domain 7
Topology diagram


Hera


Domain 8
Topology diagram


Hera


Domain 9
Topology diagram


Hera


Domain 10
Topology diagram


Hera


Domain 11
Topology diagram


Hera


Domain 12
Topology diagram


Hera


Domain 13
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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