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PDBsum entry 3ima

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ima calculated with MOLE 2.0 PDB id
3ima
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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23 tunnels, coloured by tunnel radius 24 tunnels, coloured by tunnel radius 24 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.66 12.2 0.02 0.01 13.1 79 1 1 1 4 1 0 0  
2 1.66 14.4 -0.63 -0.19 16.3 77 2 1 1 4 2 0 0  
3 1.47 19.6 -0.04 0.19 14.0 76 3 1 1 4 1 0 1  
4 1.88 7.9 0.35 -0.06 8.7 89 1 2 1 3 0 0 0  
5 2.13 8.9 -0.62 -0.17 28.4 77 2 2 0 4 0 0 0  
6 1.88 9.4 0.16 -0.12 13.8 89 1 2 1 3 0 0 0  
7 1.38 9.7 0.28 -0.33 10.7 95 0 1 0 4 0 0 0  
8 2.12 11.1 -0.57 -0.19 28.6 77 2 2 0 4 0 0 0  
9 1.43 11.6 0.81 -0.09 6.6 94 0 1 1 5 0 0 0  
10 1.60 9.5 0.20 0.09 1.8 79 0 0 2 2 2 1 0  
11 1.64 12.5 -0.63 -0.30 12.8 91 1 2 1 4 0 0 0  
12 1.65 13.7 0.09 -0.11 10.3 92 1 1 1 5 0 0 0  
13 1.81 8.3 -1.98 -0.25 4.6 89 1 0 3 1 1 0 0  
14 1.72 8.4 -1.67 -0.10 2.3 83 0 0 3 1 2 0 0  
15 1.49 15.8 -0.10 0.43 9.9 67 1 1 1 3 2 0 2  
16 1.49 17.7 0.26 0.31 9.6 67 1 1 1 3 2 0 2  
17 1.50 19.0 0.13 0.28 10.7 69 1 1 2 3 2 0 2  
18 1.36 8.1 -1.35 -0.11 18.8 69 1 0 1 1 1 0 0  
19 1.76 10.2 -1.28 -0.32 15.6 67 1 0 1 1 1 1 0  
20 1.77 10.8 -1.06 -0.23 16.1 62 1 0 0 1 1 2 0  
21 1.77 4.2 -0.92 0.05 7.3 44 1 0 0 0 2 0 0  
22 1.41 13.4 -0.01 0.03 13.1 84 2 1 2 4 0 0 0  
23 1.80 5.2 -2.18 -0.69 26.1 82 2 1 0 0 0 0 0  
24 1.72 3.6 -2.10 -0.29 9.8 74 1 0 2 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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