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PDBsum entry 3ijx

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3ijx calculated with MOLE 2.0 PDB id
3ijx
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 2.81 32.8 -1.66 -0.46 27.2 84 5 3 1 4 1 0 0  
2 1.52 1.73 38.1 -0.71 -0.31 18.7 80 4 4 1 4 3 0 0  
3 3.13 3.33 47.2 -1.59 -0.40 20.9 87 5 4 6 2 2 0 0  
4 2.07 2.33 49.0 -1.06 -0.31 12.7 87 2 4 5 2 3 0 0  
5 2.05 2.34 55.5 -2.02 -0.47 24.0 82 9 5 2 2 2 1 0  
6 2.03 2.42 64.3 -1.70 -0.60 23.3 86 9 6 4 6 1 0 0  
7 2.07 2.33 65.3 -1.98 -0.38 25.6 84 10 3 3 6 1 0 0  
8 2.06 2.34 73.3 -2.12 -0.53 27.4 85 13 7 3 5 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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