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PDBsum entry 3ije

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Pore analysis for: 3ije calculated with MOLE 2.0 PDB id
3ije
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.23 3.56 32.3 -0.33 -0.11 11.6 76 3 2 2 1 4 1 0  NAG 1 G NAG 2 G
2 2.97 3.74 33.9 -1.80 -0.62 19.6 86 3 4 5 2 1 1 0  
3 1.15 2.62 34.4 1.09 0.31 5.7 81 3 2 3 7 2 1 0  
4 1.13 1.61 40.2 -1.73 -0.60 16.8 91 1 3 4 1 1 1 0  
5 4.21 5.42 42.2 -0.91 -0.19 13.6 85 3 2 3 1 3 1 0  NAG 1 G NAG 2 G
6 1.49 1.62 47.1 -1.86 -0.52 22.3 87 4 3 10 2 1 2 0  
7 2.30 2.57 49.4 -1.57 -0.57 23.4 86 3 8 3 4 0 1 0  
8 2.24 4.82 56.4 -2.33 -0.66 23.8 87 5 6 10 1 2 3 0  
9 3.09 6.18 58.4 -1.58 -0.58 21.8 83 6 6 3 4 0 1 0  
10 2.23 4.88 67.1 -1.74 -0.42 24.1 82 7 7 7 1 4 3 0  NAG 1 G NAG 2 G
11 2.20 2.20 66.9 -1.14 -0.40 19.1 81 3 6 4 4 2 1 1  
12 2.22 2.21 71.9 -1.01 -0.40 18.8 81 6 4 5 4 1 0 1  
13 2.31 2.58 72.4 -1.63 -0.50 23.8 83 8 7 4 7 0 1 0  
14 3.11 3.12 74.6 -1.14 -0.40 18.4 80 3 8 5 3 3 1 0  NAG 1 G NAG 2 G
15 2.52 2.67 87.6 -1.55 -0.55 19.4 85 5 7 9 5 1 1 1  
16 1.30 1.60 132.5 -1.68 -0.57 23.4 83 9 12 7 5 5 1 0  NAG 2 G
17 1.29 1.63 150.9 -1.55 -0.55 21.6 82 10 11 13 7 4 1 2  
18 1.18 1.18 262.6 -0.69 -0.29 13.6 83 11 20 19 21 9 5 0  NAG 2 G NAG 1 L NAG 2 L BMA 3 L
19 1.20 1.07 282.2 -1.02 -0.29 15.2 82 15 19 21 16 12 3 1  NAG 2 G NAG 1 J NAG 1 L NAG 2 L BMA 3 L
20 1.36 1.36 25.7 -1.21 -0.23 13.7 82 3 1 2 2 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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