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PDBsum entry 3ije
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Pore analysis for: 3ije calculated with MOLE 2.0
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PDB id
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3ije
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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23 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.23 |
3.56 |
32.3 |
-0.33 |
-0.11 |
11.6 |
76 |
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3 |
2 |
2 |
1 |
4 |
1 |
0 |
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NAG 1 G NAG 2 G
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2 |
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2.97 |
3.74 |
33.9 |
-1.80 |
-0.62 |
19.6 |
86 |
3 |
4 |
5 |
2 |
1 |
1 |
0 |
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3 |
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1.15 |
2.62 |
34.4 |
1.09 |
0.31 |
5.7 |
81 |
3 |
2 |
3 |
7 |
2 |
1 |
0 |
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4 |
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1.13 |
1.61 |
40.2 |
-1.73 |
-0.60 |
16.8 |
91 |
1 |
3 |
4 |
1 |
1 |
1 |
0 |
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5 |
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4.21 |
5.42 |
42.2 |
-0.91 |
-0.19 |
13.6 |
85 |
3 |
2 |
3 |
1 |
3 |
1 |
0 |
NAG 1 G NAG 2 G
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6 |
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1.49 |
1.62 |
47.1 |
-1.86 |
-0.52 |
22.3 |
87 |
4 |
3 |
10 |
2 |
1 |
2 |
0 |
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7 |
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2.30 |
2.57 |
49.4 |
-1.57 |
-0.57 |
23.4 |
86 |
3 |
8 |
3 |
4 |
0 |
1 |
0 |
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8 |
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2.24 |
4.82 |
56.4 |
-2.33 |
-0.66 |
23.8 |
87 |
5 |
6 |
10 |
1 |
2 |
3 |
0 |
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9 |
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3.09 |
6.18 |
58.4 |
-1.58 |
-0.58 |
21.8 |
83 |
6 |
6 |
3 |
4 |
0 |
1 |
0 |
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10 |
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2.23 |
4.88 |
67.1 |
-1.74 |
-0.42 |
24.1 |
82 |
7 |
7 |
7 |
1 |
4 |
3 |
0 |
NAG 1 G NAG 2 G
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11 |
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2.20 |
2.20 |
66.9 |
-1.14 |
-0.40 |
19.1 |
81 |
3 |
6 |
4 |
4 |
2 |
1 |
1 |
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12 |
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2.22 |
2.21 |
71.9 |
-1.01 |
-0.40 |
18.8 |
81 |
6 |
4 |
5 |
4 |
1 |
0 |
1 |
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13 |
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2.31 |
2.58 |
72.4 |
-1.63 |
-0.50 |
23.8 |
83 |
8 |
7 |
4 |
7 |
0 |
1 |
0 |
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14 |
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3.11 |
3.12 |
74.6 |
-1.14 |
-0.40 |
18.4 |
80 |
3 |
8 |
5 |
3 |
3 |
1 |
0 |
NAG 1 G NAG 2 G
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15 |
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2.52 |
2.67 |
87.6 |
-1.55 |
-0.55 |
19.4 |
85 |
5 |
7 |
9 |
5 |
1 |
1 |
1 |
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16 |
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1.30 |
1.60 |
132.5 |
-1.68 |
-0.57 |
23.4 |
83 |
9 |
12 |
7 |
5 |
5 |
1 |
0 |
NAG 2 G
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17 |
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1.29 |
1.63 |
150.9 |
-1.55 |
-0.55 |
21.6 |
82 |
10 |
11 |
13 |
7 |
4 |
1 |
2 |
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18 |
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1.18 |
1.18 |
262.6 |
-0.69 |
-0.29 |
13.6 |
83 |
11 |
20 |
19 |
21 |
9 |
5 |
0 |
NAG 2 G NAG 1 L NAG 2 L BMA 3 L
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19 |
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1.20 |
1.07 |
282.2 |
-1.02 |
-0.29 |
15.2 |
82 |
15 |
19 |
21 |
16 |
12 |
3 |
1 |
NAG 2 G NAG 1 J NAG 1 L NAG 2 L BMA 3 L
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20 |
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1.36 |
1.36 |
25.7 |
-1.21 |
-0.23 |
13.7 |
82 |
3 |
1 |
2 |
2 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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