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PDBsum entry 3ij0

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Tunnel analysis for: 3ij0 calculated with MOLE 2.0 PDB id
3ij0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 1.65 26.7 -1.60 -0.38 13.5 71 3 1 2 1 3 1 1  
2 1.36 1.65 30.6 -1.79 -0.27 15.2 69 2 2 3 1 3 1 1  
3 1.28 1.29 29.4 0.11 -0.07 7.8 79 1 3 2 5 0 2 0  
4 2.54 2.60 17.5 -0.41 0.74 5.7 65 2 0 1 0 4 0 0  M3L 9 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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