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PDBsum entry 3ifq

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protein ligands Protein-protein interface(s) links
Cell adhesion PDB id
3ifq

 

 

 

 

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Contents
Protein chains
546 a.a. *
93 a.a. *
Ligands
SO4 ×3
* Residue conservation analysis
PDB id:
3ifq
Name: Cell adhesion
Title: Interction of plakoglobin and beta-catenin with desmosomal cadherins
Structure: Plakoglobin. Chain: a, b. Fragment: residues 124-676. Synonym: desmoplakin-3, desmoplakin iii, catenin gamma. Engineered: yes. E-cadherin. Chain: c, d. Fragment: residues 778-884. Synonym: epithelial cadherin, cadherin-1, uvomorulin, arc-1, e-
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: jup, ctnng, dp3. Expressed in: escherichia coli. Expression_system_taxid: 562. Mus musculus. Mouse. Organism_taxid: 10090.
Resolution:
2.80Å     R-factor:   0.201     R-free:   0.261
Authors: H.-J.Choi,J.C.Gross,S.Pokutta,W.I.Weis
Key ref: H.J.Choi et al. (2009). Interactions of plakoglobin and beta-catenin with desmosomal cadherins: basis of selective exclusion of alpha- and beta-catenin from desmosomes. J Biol Chem, 284, 31776-31788. PubMed id: 19759396
Date:
24-Jul-09     Release date:   15-Sep-09    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P14923  (PLAK_HUMAN) -  Junction plakoglobin from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
745 a.a.
546 a.a.
Protein chains
Pfam   ArchSchema ?
P09803  (CADH1_MOUSE) -  Cadherin-1 from Mus musculus
Seq:
Struc:
 
Seq:
Struc:
884 a.a.
93 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
J Biol Chem 284:31776-31788 (2009)
PubMed id: 19759396  
 
 
Interactions of plakoglobin and beta-catenin with desmosomal cadherins: basis of selective exclusion of alpha- and beta-catenin from desmosomes.
H.J.Choi, J.C.Gross, S.Pokutta, W.I.Weis.
 
  ABSTRACT  
 
Plakoglobin and beta-catenin are homologous armadillo repeat proteins found in adherens junctions, where they interact with the cytoplasmic domain of classical cadherins and with alpha-catenin. Plakoglobin, but normally not beta-catenin, is also a structural constituent of desmosomes, where it binds to the cytoplasmic domains of the desmosomal cadherins, desmogleins and desmocollins. Here, we report structural, biophysical, and biochemical studies aimed at understanding the molecular basis of selective exclusion of beta-catenin and alpha-catenin from desmosomes. The crystal structure of the plakoglobin armadillo domain bound to phosphorylated E-cadherin shows virtually identical interactions to those observed between beta-catenin and E-cadherin. Trypsin sensitivity experiments indicate that the plakoglobin arm domain by itself is more flexible than that of beta-catenin. Binding of plakoglobin and beta-catenin to the intracellular regions of E-cadherin, desmoglein1, and desmocollin1 was measured by isothermal titration calorimetry. Plakoglobin and beta-catenin bind strongly and with similar thermodynamic parameters to E-cadherin. In contrast, beta-catenin binds to desmoglein-1 more weakly than does plakoglobin. beta-Catenin and plakoglobin bind with similar weak affinities to desmocollin-1. Full affinity binding of desmoglein-1 requires sequences C-terminal to the region homologous to the catenin-binding domain of classical cadherins. Although pulldown assays suggest that the presence of N- and C-terminal beta-catenin "tails" that flank the armadillo repeat region reduces the affinity for desmosomal cadherins, calorimetric measurements show no significant effects of the tails on binding to the cadherins. Using purified proteins, we show that desmosomal cadherins and alpha-catenin compete directly for binding to plakoglobin, consistent with the absence of alpha-catenin in desmosomes.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21464301 A.Al-Amoudi, D.Castaño-Diez, D.P.Devos, R.B.Russell, G.T.Johnson, and A.S.Frangakis (2011).
The three-dimensional molecular structure of the desmosomal plaque.
  Proc Natl Acad Sci U S A, 108, 6480-6485.  
21157775 R.J.Falconer, and B.M.Collins (2011).
Survey of the year 2009: applications of isothermal titration calorimetry.
  J Mol Recognit, 24, 1.  
20626351 H.A.Thomason, A.Scothern, S.McHarg, and D.R.Garrod (2010).
Desmosomes: adhesive strength and signalling in health and disease.
  Biochem J, 429, 419-433.  
20164302 P.D.McCrea, and D.Gu (2010).
The catenin family at a glance.
  J Cell Sci, 123, 637-642.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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