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PDBsum entry 3iby
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Tunnel analysis for: 3iby calculated with  MOLE 2.0
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PDB id
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3iby
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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18 tunnels,
coloured by tunnel radius |
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18 tunnels,
coloured by
tunnel radius
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18 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.88 |
1.93 |
19.1 |
-0.65 |
-0.28 |
3.0 |
78 |
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1 |
0 |
5 |
4 |
1 |
0 |
0 |
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2 |
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1.88 |
1.94 |
22.1 |
-1.33 |
-0.38 |
2.6 |
86 |
0 |
0 |
7 |
4 |
1 |
1 |
0 |
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3 |
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1.87 |
1.93 |
23.8 |
-1.85 |
-0.47 |
2.8 |
81 |
0 |
0 |
7 |
2 |
1 |
2 |
0 |
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4 |
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1.22 |
1.22 |
24.2 |
-1.70 |
-0.72 |
6.6 |
96 |
2 |
2 |
3 |
2 |
0 |
0 |
0 |
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5 |
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2.63 |
4.20 |
24.6 |
-2.31 |
-0.62 |
2.9 |
97 |
0 |
0 |
8 |
3 |
0 |
1 |
0 |
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6 |
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2.60 |
2.71 |
24.7 |
-2.11 |
-0.59 |
2.8 |
97 |
0 |
0 |
8 |
3 |
0 |
1 |
0 |
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7 |
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1.87 |
1.92 |
26.1 |
-1.67 |
-0.44 |
2.7 |
86 |
0 |
0 |
8 |
4 |
1 |
1 |
0 |
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8 |
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1.22 |
1.22 |
26.8 |
-1.77 |
-0.75 |
6.6 |
98 |
3 |
1 |
4 |
1 |
0 |
0 |
0 |
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9 |
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2.41 |
2.83 |
27.5 |
-2.18 |
-0.60 |
2.8 |
97 |
0 |
0 |
10 |
3 |
0 |
1 |
0 |
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10 |
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2.24 |
3.28 |
29.3 |
-2.34 |
-0.62 |
2.9 |
97 |
0 |
0 |
10 |
3 |
0 |
1 |
0 |
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11 |
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1.87 |
1.93 |
35.4 |
-2.24 |
-0.55 |
2.9 |
90 |
0 |
0 |
13 |
4 |
1 |
1 |
0 |
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12 |
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1.24 |
1.24 |
46.4 |
-2.35 |
-0.77 |
4.0 |
101 |
0 |
1 |
13 |
1 |
0 |
1 |
0 |
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13 |
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1.24 |
1.24 |
50.5 |
-2.06 |
-0.63 |
4.3 |
93 |
2 |
2 |
12 |
4 |
1 |
0 |
0 |
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14 |
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1.25 |
1.24 |
52.2 |
-1.96 |
-0.63 |
3.6 |
94 |
0 |
1 |
14 |
2 |
1 |
1 |
0 |
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15 |
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1.18 |
1.18 |
27.1 |
0.87 |
0.31 |
8.2 |
75 |
4 |
1 |
2 |
6 |
2 |
1 |
0 |
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16 |
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0.98 |
1.56 |
15.2 |
-0.48 |
-0.51 |
12.2 |
81 |
0 |
1 |
1 |
2 |
0 |
1 |
1 |
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17 |
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1.03 |
1.52 |
15.5 |
0.55 |
-0.11 |
8.6 |
81 |
0 |
1 |
1 |
3 |
0 |
0 |
2 |
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18 |
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1.23 |
1.31 |
16.8 |
-0.73 |
-0.34 |
12.0 |
76 |
1 |
2 |
1 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program