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PDBsum entry 3iai

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3iai calculated with MOLE 2.0 PDB id
3iai
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.07 10.5 -2.45 -0.15 28.1 89 3 0 3 0 1 1 0  263 AZM D,300 GOL D
2 1.89 11.4 -2.37 -0.13 26.9 77 3 0 2 0 2 1 0  263 AZM D,300 GOL D
3 2.24 10.6 0.38 -0.05 5.1 73 0 1 1 4 1 1 0  304 GOL C
4 1.80 15.6 -0.01 -0.32 5.1 74 1 0 1 4 1 1 0  304 GOL C
5 2.96 3.0 0.23 -0.37 2.4 103 0 0 2 2 0 0 0  
6 3.07 10.4 -0.06 -0.42 2.6 99 0 0 3 2 0 0 0  
7 1.32 12.4 0.63 0.14 5.0 69 1 0 1 4 0 1 0  
8 2.14 9.0 0.45 0.04 3.9 69 0 1 1 3 1 1 0  304 GOL D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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