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PDBsum entry 3i9d

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Top Page protein dna_rna ligands metals Protein-protein interface(s) links
Protein chain I PDB id
3i9d
Protein chain I highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
1 sheet
1 beta hairpin
1 beta bulge
4 strands
8 beta turns
1 gamma turn
PROSITE
RIBOSOMAL_S6
Chain 237 a.a.
Chain 205 a.a.
Chain 208 a.a.
Chain 151 a.a.
Chain 101 a.a.
Chain 155 a.a.
Chain 138 a.a.
Chain 127 a.a.
Chain 99 a.a.
Chain 119 a.a.
Chain 125 a.a.
Chain 121 a.a.
Chain 60 a.a.
Chain 88 a.a.
Chain 84 a.a.
Chain 100 a.a.
Chain 70 a.a.
Chain 84 a.a.
Chain 99 a.a.
Chain 25 a.a.
  
Chain (101 residues)

UniProt code: Q5SLP8 (RS6_THET8)   [Pfam]

structural classification (1 domain) :
Domain Links CATH no.   Class Architecture
1 3.30.70.60 = Alpha Beta 2-Layer Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to DNA/RNA
PROSITE patterns:   
Low   High conservation


FASTA
file
Domain 1
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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