spacer
spacer

PDBsum entry 3i8f

Go to PDB code: 
Top Page protein dna_rna Protein-protein interface(s) links
Protein chain O PDB id
3i8f
Protein chain O highlighted
(click to view)
 
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
1 sheet
1 beta alpha beta unit
3 strands
19 beta turns
10 gamma turns
PROSITE
RIBOSOMAL_L15
Chain 272 a.a.
Chain 205 a.a.
Chain 208 a.a.
Chain 181 a.a.
Chain 170 a.a.
Chain 146 a.a.
Chain 138 a.a.
Chain 122 a.a.
Chain 150 a.a.
Chain 141 a.a.
Chain 117 a.a.
Chain 111 a.a.
Chain 137 a.a.
Chain 117 a.a.
Chain 101 a.a.
Chain 113 a.a.
Chain 92 a.a.
Chain 102 a.a.
Chain 187 a.a.
Chain 84 a.a.
Chain 97 a.a.
Chain 69 a.a.
Chain 59 a.a.
Chain 71 a.a.
Chain 59 a.a.
Chain 45 a.a.
Chain 49 a.a.
Chain 64 a.a.
  
Residue conservation: Chain (150 residues)

UniProt code: Q5SHQ7   [Pfam]

Sequence coloured by residue conservation:

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn
Residue contacts:   
    to DNA/RNA
PROSITE patterns:   
Low   High conservation
Conservation colouring:     Low 1 2 3 4 5 6 7 8 9 High
View:
Protein surface showing most poorly (1) and highly conserved (7 8 9) regions
ConSurf representation of conserved regions: 1 2 3 4 5 6 7 8 9
Download tab-separated text file of ConSurf analysis
Generate Raster3D image of surface coloured by conservation
ConSurf-DB ConSurf-DB data (including mult seq alignment) for 3i8f, chain O
Residue conservation calculated by ConSurf-DB.
  
spacer
spacer