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PDBsum entry 3i8f

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Top Page protein dna_rna Protein-protein interface(s) links
Protein chain M PDB id
3i8f
Protein chain M highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
2 sheets
1 beta alpha beta unit
1 beta hairpin
5 strands
15 beta turns
2 gamma turns
PROSITE
RIBOSOMAL_L13
Chain 272 a.a.
Chain 205 a.a.
Chain 208 a.a.
Chain 181 a.a.
Chain 170 a.a.
Chain 146 a.a.
Chain 138 a.a.
Chain 122 a.a.
Chain 150 a.a.
Chain 141 a.a.
Chain 117 a.a.
Chain 111 a.a.
Chain 137 a.a.
Chain 117 a.a.
Chain 101 a.a.
Chain 113 a.a.
Chain 92 a.a.
Chain 102 a.a.
Chain 187 a.a.
Chain 84 a.a.
Chain 97 a.a.
Chain 69 a.a.
Chain 59 a.a.
Chain 71 a.a.
Chain 59 a.a.
Chain 45 a.a.
Chain 49 a.a.
Chain 64 a.a.
  
Chain (138 residues)

UniProt code: P60488 (RL13_THET8)   [Pfam]

structural classification (1 domain) :
Domain Links CATH no.   Class Architecture
1 3.90.1180.10 = Alpha Beta Alpha-Beta Complex

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to DNA/RNA
PROSITE patterns:   
Low   High conservation


FASTA
file
Domain 1
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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