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PDBsum entry 3i4m

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Top Page protein dna_rna metals Protein-protein interface(s) links
Protein chain A PDB id
3i4m
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
21 sheets
16 beta hairpins
1 psi loop
9 beta bulges
47 strands
57 helices
88 helix-helix interacs
169 beta turns
32 gamma turns
Chain 1429 a.a.
Chain 1125 a.a.
Chain 270 a.a.
Chain 187 a.a.
Chain 214 a.a.
Chain 88 a.a.
Chain 171 a.a.
Chain 137 a.a.
Chain 116 a.a.
Chain 65 a.a.
Chain 116 a.a.
Chain 47 a.a.
  
Chain (1429 residues)

UniProt code: P04050 (RPB1_YEAST)   [Pfam]

Secondary structure:

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to DNA/RNA     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9


FASTA
file
Topology
Topology diagram




Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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