PDBsum entry 3hw8 Go to PDB code:  Tunnel analysis for: 3hw8 calculated with MOLE 2.0 PDB id 3hw8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 1.71 21.0 -0.15 -0.41 4.8 90 1 0 1 2 0 0 0  DA 9 B DC 10 B DT 11 B DG 12 B DG 3 C DT 4 C 2 1.57 1.57 21.2 0.07 -0.26 5.5 84 1 0 1 3 0 0 0  DA 9 B DC 10 B DT 11 B DG 12 B DG 3 C DT 4 C DA 5 C DT 6 C 3 1.49 1.49 22.2 -1.85 -0.29 20.7 79 3 2 2 2 1 1 0  DA 7 B DT 8 B DA 9 B DT 6 C 4 1.36 1.44 23.7 -1.74 -0.31 20.7 77 2 2 2 3 1 1 0  DT 8 B DA 9 B DA 5 C DT 6 C 5 1.38 1.39 25.9 -1.90 -0.35 21.5 79 2 2 2 2 1 1 0  DT 8 B DA 9 B DC 10 B DA 5 C DT 6 C 6 1.38 1.45 31.9 -0.93 -0.26 14.1 79 2 1 1 3 1 0 0  DA 7 B DT 8 B DA 9 B DC 10 B DT 11 B DG 12 B DG 3 C DT 4 C DA 5 C DT 6 C 7 1.27 1.62 15.9 0.64 0.29 14.8 76 2 1 0 7 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.