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PDBsum entry 3hs0

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Pore analysis for: 3hs0 calculated with MOLE 2.0 PDB id
3hs0
Pores calculated on whole structure Pores calculated excluding ligands

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24 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.96 37.2 0.48 0.34 14.3 78 3 3 0 5 3 1 2  
2 2.30 2.79 54.2 -0.81 -0.30 21.0 82 5 8 5 8 1 1 1  
3 1.62 1.97 59.2 -1.90 -0.46 23.7 80 6 5 1 2 3 1 0  
4 1.28 2.30 78.3 -2.09 -0.49 27.0 80 9 8 3 1 3 1 0  
5 2.50 3.75 94.7 -1.46 -0.47 17.4 86 5 6 10 6 0 5 0  
6 2.18 2.26 96.1 -0.91 -0.41 15.1 88 6 8 9 11 0 2 0  
7 2.88 2.99 100.1 -1.87 -0.64 21.3 88 8 5 7 4 0 0 0  
8 2.47 3.19 100.6 -1.75 -0.59 21.5 86 8 7 9 6 0 1 0  
9 2.20 2.28 104.5 -0.90 -0.51 10.1 90 5 3 10 8 0 1 0  NAG 9117 D
10 2.52 3.28 108.6 -1.77 -0.50 22.3 82 11 10 10 8 2 2 0  
11 2.39 2.50 109.6 -0.58 -0.25 14.9 83 6 14 11 14 4 2 1  
12 1.26 2.56 113.4 -1.03 -0.24 18.1 82 9 7 8 7 4 1 0  NAG 9187 A
13 2.20 2.32 115.4 -1.81 -0.62 19.6 90 8 7 12 5 0 1 0  NAG 9117 D
14 1.34 1.51 120.9 -1.24 -0.39 15.3 82 10 11 10 8 5 5 0  
15 2.28 3.83 123.9 -1.13 -0.35 17.3 80 9 13 9 12 6 1 0  
16 2.21 2.37 133.2 -2.12 -0.72 23.7 88 8 13 12 6 0 0 0  
17 2.46 3.33 141.3 -1.91 -0.62 23.6 86 12 8 8 8 0 1 0  
18 1.76 1.90 143.5 -1.51 -0.47 19.1 81 11 13 11 8 5 4 0  NAG 2 J
19 2.23 2.40 149.9 -1.51 -0.51 17.6 87 11 5 12 7 2 1 0  NAG 9117 D NAG 1 E NAG 2 E
20 2.37 2.39 154.4 -1.71 -0.56 17.9 87 9 13 15 6 3 1 0  
21 1.18 3.21 177.6 -1.91 -0.58 23.6 85 15 9 12 8 0 6 0  
22 1.75 1.89 184.8 -1.21 -0.50 16.8 82 12 15 11 13 5 4 0  NAG 2 J
23 1.68 2.97 190.7 -1.67 -0.48 21.3 83 13 15 11 14 5 2 0  NAG 1 E NAG 2 E
24 1.44 2.82 212.8 -1.10 -0.36 18.4 81 13 18 10 18 7 5 0  NAG 1 E NAG 2 E NAG 2 J
25 1.81 1.92 223.7 -0.98 -0.37 15.3 82 14 14 16 16 7 5 0  NAG 9117 D NAG 1 E NAG 2 E NAG 2 J
26 1.66 1.80 230.8 -1.19 -0.45 14.0 84 16 12 19 12 6 6 0  
27 2.70 2.71 250.4 -1.25 -0.51 15.4 86 17 14 20 12 6 1 0  NAG 9117 I NAG 1 J NAG 2 J
28 2.19 2.29 254.9 -1.16 -0.31 15.9 83 12 14 15 19 6 3 0  NAG 1 E NAG 2 E
29 2.36 2.38 289.3 -1.08 -0.41 14.3 86 19 13 25 15 8 2 0  NAG 1 E NAG 2 E NAG 9117 I NAG 1 J NAG 2 J

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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