PDBsum entry 3hrz

Pore analysis for: 3hrz calculated with

MOLE 2.0

PDB id

3hrz

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.53

2.64

27.7

-1.96

0.21

24.2

77

3

2

1

0

1

0

0

NAG 9117 D

2

2.36

2.39

29.2

-2.88

-0.68

36.2

78

3

5

1

0

1

1

0

3

1.45

1.45

32.5

-1.10

-0.37

11.6

77

3

2

0

1

3

0

0

4

2.89

4.28

39.9

-2.67

-0.67

28.6

85

6

4

5

2

0

1

0

PO4 744 D

5

1.81

2.38

43.5

-1.69

-0.33

23.5

83

7

7

5

5

1

1

0

PO4 743 D

6

1.57

1.97

47.1

-1.28

-0.48

12.8

85

5

5

8

4

0

2

0

7

1.27

1.48

60.6

-1.78

-0.47

24.6

75

7

8

4

3

4

2

0

8

2.26

3.29

82.6

-0.76

-0.29

18.8

82

7

7

6

10

0

3

1

9

2.53

2.62

94.7

-2.21

-0.82

22.3

91

6

12

10

1

0

0

0

PO4 745 D

10

1.43

4.46

102.7

-2.20

-0.49

30.2

82

7

7

4

6

1

0

0

P6G 100 C

11

1.39

1.51

113.6

-0.96

-0.31

19.2

77

13

10

6

12

4

5

1

12

2.58

4.09

179.1

-0.53

-0.29

12.5

85

13

10

12

13

3

4

1

P6G 630 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.