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PDBsum entry 3ho5

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 3ho5 calculated with MOLE 2.0 PDB id
3ho5
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 1.69 33.1 -0.52 -0.14 14.9 75 4 3 2 3 0 2 2  
2 1.26 1.42 33.6 -0.31 -0.08 13.0 74 4 2 2 2 0 1 2  
3 2.36 2.59 37.7 -1.04 -0.51 17.7 83 4 2 2 5 0 2 0  
4 1.43 3.82 39.1 -0.11 -0.10 11.3 74 2 2 6 8 0 0 4  
5 1.96 2.30 66.1 -1.39 -0.50 19.3 83 8 2 2 5 0 1 0  
6 2.20 2.20 87.4 -1.89 -0.36 25.2 81 8 5 3 3 1 1 0  
7 1.21 1.35 92.8 -1.03 -0.21 18.1 84 5 3 2 4 1 3 0  
8 1.15 1.52 26.7 0.55 0.16 10.7 80 2 4 0 5 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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