PDBsum entry 3hkm

Hydrolase

PDB id: 3hkm

Contents

Protein chains

207 a.a. *

195 a.a. *

Waters ×416

* Residue conservation analysis

PDB id:

3hkm

Name:

Hydrolase

Title:

Crystal structure of rice(oryza sativa) rrp46

Structure:

Os03g0854200 protein. Chain: a, b, c. Synonym: rrp46, cdna clone:j023009h04, full insert sequence, 3' exoribonuclease family, domain 1 containing protein, expressed, putative exosome component. Engineered: yes

Source:

Oryza sativa japonica group. Rice. Organism_taxid: 39947. Strain: japonica group. Gene: putative exonuclease rrp46. Expressed in: escherichia coli. Expression_system_taxid: 562.

Resolution:

1.98Å R-factor: 0.173 R-free: 0.235

Authors:

C.-C.Yang,Y.-T.Wang,Y.-Y.Hsiao,L.G.Doudeva,H.S.Yuan

Key ref:

C.C.Yang et al. (2010). Structural and biochemical characterization of CRN-5 and Rrp46: an exosome component participating in apoptotic DNA degradation. Rna, 16, 1748-1759. PubMed id: 20660080

Date:

25-May-09 Release date: 26-Jan-10

Protein chains

Q84T68  (EXOS5_ORYSJ) -  Exosome complex exonuclease RRP46 homolog from Oryza sativa subsp. japonica

Seq: 238 a.a.

Struc: 207 a.a.

Protein chain

Q84T68  (EXOS5_ORYSJ) -  Exosome complex exonuclease RRP46 homolog from Oryza sativa subsp. japonica

Seq: 238 a.a.

Struc: 195 a.a.

Enzyme reactions

• Enzyme class: Chains A, B, C: E.C.3.1.13.- - ?????

Rna 16:1748-1759 (2010)

PubMed id: 20660080

Structural and biochemical characterization of CRN-5 and Rrp46: an exosome component participating in apoptotic DNA degradation.

C.C.Yang, Y.T.Wang, Y.Y.Hsiao, L.G.Doudeva, P.H.Kuo, S.Y.Chow, H.S.Yuan.

ABSTRACT

No abstract given.