PDBsum entry 3hef Go to PDB code:  Tunnel analysis for: 3hef calculated with MOLE 2.0 PDB id 3hef Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 3.29 16.9 0.11 0.52 16.9 73 3 1 0 4 2 0 0   2 1.20 3.45 17.5 -0.94 0.16 26.9 70 3 2 0 3 2 0 0   3 1.23 3.30 26.4 0.96 0.35 8.0 84 2 1 3 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.