spacer
spacer

PDBsum entry 3he7

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3he7 calculated with MOLE 2.0 PDB id
3he7
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.35 2.48 33.3 1.76 0.70 2.4 76 0 1 1 10 5 1 0  AGH 307 A
2 1.49 2.33 39.5 0.72 0.35 6.2 74 2 2 1 8 3 1 2  AGH 307 A
3 1.50 2.31 44.0 2.41 0.96 0.8 65 0 0 0 14 7 1 2  AGH 307 A
4 1.17 1.35 52.0 -1.68 -0.59 12.3 82 3 3 5 0 1 1 1  
5 1.80 1.79 84.9 -1.32 -0.71 10.5 87 4 5 7 4 1 0 0  
6 1.28 1.74 154.2 -0.82 -0.25 7.9 83 3 3 16 12 6 2 1  NAG 304 A AGH 307 A
7 2.13 2.74 39.2 -2.07 -0.21 22.2 76 5 5 3 1 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer