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PDBsum entry 3h8x

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Top Page protein dna_rna tunnels links
Tunnel analysis for: 3h8x calculated with MOLE 2.0 PDB id
3h8x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.74 5.39 31.7 -0.94 0.15 18.4 80 6 1 3 3 4 0 0  DT 262 B ME6 263 B DT 264 B 2YR 265 B
2 1.25 1.25 33.8 -0.79 0.24 15.9 78 5 0 3 3 5 0 0  DT 264 B 2YR 265 B DA 266 B DT 278 C
3 1.66 1.66 53.0 -0.64 0.20 17.1 79 6 1 3 4 4 1 0  DT 264 B 2YR 265 B DA 266 B DT 267 B DT 268 B DT
272 C DC 273 C DG 274 C DC 275 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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