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Ligand clusters for UniProt code Q04830

Ligand clusters for Q04830: Endo-N-acetylneuraminidase OS=Enterobacteria phage K1F PE=1 SV=3

Top 6 (of 16) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gvjA  
 

Structures

PDB   Schematic diagram
3gvjA    
3gvlA    
3ju4A    
3gvkA    
3gw6A    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: SLB-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvl(A).


 
2. Ligand: SLB-SIA-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).


 
3. Ligand: SLB-SIA-SIA-SIA-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvj(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: SLB × 2
5-N-Acetyl-Beta-D-Neuraminic acid
PDB codes: 3gvl(A), 3ju4(A).


 
2. Ligand: SIA-SIA-SIA-SLB × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvj(A).


 
3. Ligand: SLB-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3gw6(A).


 
2. Ligand: SLB-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SLB-SIA × 1
SLB=5-N-Acetyl-Beta-D-Neuraminic acid, SIA=O-Sialic acid.
PDB code: 3gvk(A).

 

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