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PDBsum entry 3gvl

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Tunnel analysis for: 3gvl calculated with MOLE 2.0 PDB id
3gvl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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13 tunnels, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.32 27.8 -0.64 0.21 12.5 72 1 2 0 3 2 2 0  
2 1.28 28.3 -1.16 0.04 19.9 72 3 3 0 3 2 2 0  
3 1.61 13.1 -0.65 -0.43 4.1 80 0 1 1 2 0 1 0  
4 1.55 13.7 -1.25 -0.60 10.0 84 1 1 1 1 0 1 0  
5 1.43 17.7 -1.21 -0.24 20.3 73 1 1 1 1 3 1 1  
6 1.76 7.3 1.42 0.79 1.1 73 0 0 0 3 3 0 0  
7 2.46 6.8 -0.61 0.74 13.3 71 2 0 1 1 3 0 0  
8 1.52 5.4 0.98 0.39 11.6 70 1 0 0 2 1 0 0  
9 1.92 5.7 -0.19 -0.40 9.2 59 1 0 0 1 1 0 0  
10 1.97 6.6 -1.39 0.25 8.2 80 1 1 1 2 2 0 0  
11 1.98 10.2 -0.66 -0.11 16.6 85 2 0 1 1 2 0 0  
12 1.28 7.5 1.19 0.69 1.7 77 0 1 0 3 1 0 0  
13 1.29 7.9 -0.62 -0.49 5.6 83 0 1 2 0 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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