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PDBsum entry 3gvl

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Cleft analysis for: 3gvl PDB id
3gvl
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 7995.38 1.04 55.87 8 12.86 2 19.05 1 7 4 14 18 8 10 0  
2 7674.33 0.00 51.28 10 8.13 9 17.15 3 5 6 11 18 3 9 1  
3 7118.72 0.00 62.54 6 14.13 1 17.65 2 11 11 17 16 16 13 0  
4 3684.23 0.00 65.84 4 10.78 4 13.12 4 8 14 14 14 9 4 0  
5 1711.12 0.00 66.33 3 9.33 6 10.13 6 11 4 9 10 1 3 0  
6 1533.52 0.00 54.90 9 7.71 10 10.58 5 4 3 10 7 2 4 0  
7 1301.06 0.00 66.77 2 8.52 7 7.44 10 4 3 4 11 6 3 1  
8 1097.30 0.00 68.25 1 11.00 3 9.69 7 3 6 2 6 4 4 0  
9 1127.67 0.00 63.97 5 9.74 5 8.22 8 5 2 7 4 6 1 0  
10 861.89 0.00 57.91 7 8.23 8 7.95 9 1 2 5 3 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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