spacer
spacer

PDBsum entry 3gvk

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Protein chain A    -    representing identical chains: B C PDB id
3gvk
Protein chain A highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
16 sheets
23 beta hairpins
10 beta bulges
55 strands
4 helices
77 beta turns
5 gamma turns
  
Chain & (644 residues)

UniProt code: Q04830 (ENAN_BPK1F)   [Pfam]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 3.30.750.60 = Alpha Beta 2-Layer Sandwich
2 2.120.10.10 = Mainly Beta 6 Propellor
3 2.40.30.20 = Mainly Beta Beta Barrel
4 4.10.1090.10 = Few Secondary Structures Irregular

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to ligand     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2  BC3  BC4  BC5  BC6
 BC7  BC8  BC9  CC1  CC2
 CC3  CC4  CC5  CC6  CC7
 CC8  CC9

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
spacer
spacer