PDBsum entry 3gv5 Go to PDB code:  Pore analysis for: 3gv5 calculated with MOLE 2.0 PDB id 3gv5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.62 99.5 -1.57 -0.26 27.0 77 9 4 3 5 0 1 0  MSE 105 B ADI 424 D DA 869 E DT 870 E DA 872 E DG 873 E DA 838 F DT 839 F DT 840 F DA 848 F 2 1.41 2.06 115.9 0.13 0.10 13.5 77 8 2 3 12 2 1 0  MSE 105 B MSE 135 B MSE 183 B MSE 187 B 3 1.67 1.67 137.9 -0.73 -0.25 16.2 75 13 4 3 10 4 1 1  MSE 135 B MSE 183 B MSE 187 B ADI 424 D DA 869 E DT 870 E DA 872 E DG 873 E DA 838 F DT 839 F DT 840 F 4 1.26 1.49 193.9 -0.63 -0.15 9.0 79 5 4 6 9 3 4 2  MSE 380 B MSE 383 B CA 421 B DG 865 P DT 866 P DG 867 P DC 843 T DA 844 T DT 845 T DC 846 T 5 1.39 1.49 212.8 -1.65 -0.31 23.9 80 17 11 8 8 4 2 0  MSE 79 B MSE 105 B CA 423 B ADI 425 B DG 873 P DC 837 T DA 838 T DT 842 T DC 843 T 6 1.33 1.44 308.9 -1.08 -0.31 17.9 81 15 9 10 14 2 3 3  MSE 79 B MSE 380 B MSE 383 B MSE 388 B MSE 394 B CA 423 B ADI 425 B ADI 424 D DA 869 E DT 870 E DA 872 E DG 873 E DA 838 F DT 839 F DT 840 F DA 848 F CA 1 P DG 865 P DT 866 P DG 867 P DG 868 P DT 870 P DA 872 P DG 873 P DC 837 T DA 838 T DT 839 T DT 840 T DT 842 T DC 843 T DA 844 T DT 845 T DC 849 T 7 1.24 1.50 325.1 -0.30 -0.12 12.6 79 15 7 8 20 4 4 3  MSE 79 B MSE 135 B MSE 183 B MSE 187 B MSE 380 B MSE 383 B MSE 388 B MSE 394 B CA 423 B ADI 425 B CA 1 P DG 865 P DT 866 P DG 867 P DG 868 P DT 870 P DA 872 P DG 873 P DC 837 T DA 838 T DT 839 T DT 840 T DT 842 T DC 843 T DA 844 T DT 845 T DA 848 T DC 849 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.