PDBsum entry 3gtk Go to PDB code:  Pore analysis for: 3gtk calculated with MOLE 2.0 PDB id 3gtk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.76 2.77 29.5 -0.93 -0.58 12.7 76 2 1 1 1 0 1 0  DC 9 N DG 10 N DG 11 N DT 12 N DA 13 N DG 14 N DC 5 T DG 6 T DT 8 T DA 9 T DA 10 T 2 1.68 1.85 42.9 0.42 0.17 8.2 84 2 3 2 7 3 1 0  DC 9 N DG 10 N DT 8 T DA 9 T DA 10 T 3 1.69 1.85 68.6 -0.34 -0.20 11.6 84 7 4 2 9 2 1 0  DC 4 N DT 5 N DA 7 T DC 12 T DA 13 T DG 14 T DA 15 T 4 1.15 1.42 71.1 -1.22 -0.07 20.9 72 7 7 2 6 3 3 0  DC 9 N DG 10 N DT 8 T DA 9 T DA 10 T 5 1.95 2.58 75.3 -1.37 -0.48 20.4 84 9 8 5 6 3 2 0  DA 9 T DA 10 T 6 1.40 1.40 83.7 -0.69 -0.18 14.7 83 6 1 3 5 3 0 0  DC 9 N DG 10 N DA 10 T 7 1.52 1.71 89.3 -2.15 -0.61 28.9 84 13 14 5 4 0 1 0  DA 9 T DA 10 T 8 2.49 3.43 91.8 -1.86 -0.45 22.9 83 11 4 6 6 2 0 0  DG 3 N DC 4 N DC 9 N DG 10 N DA 7 T DT 8 T DA 9 T DA 10 T 9 2.75 2.75 101.8 -1.75 -0.44 24.6 81 15 6 4 8 0 4 0  DT 5 N A 1 R G 4 R A 5 R G 6 R A 7 R DC 12 T DA 13 T DG 14 T DA 15 T DG 17 T DA 18 T DT 24 T DC 25 T 10 2.12 2.12 109.8 -1.15 -0.38 17.6 89 10 7 9 7 0 2 0  DC 1 N DA 9 T DA 10 T 11 2.00 2.73 114.7 -1.22 -0.19 15.5 82 10 4 11 10 5 1 0   12 1.52 1.70 116.5 -1.67 -0.50 24.8 83 18 14 6 7 3 3 0   13 2.94 3.23 127.3 -1.42 -0.28 20.5 81 15 6 4 10 1 4 0  A 1 R DC 25 T DG 26 T DA 27 T DT 28 T 14 2.64 2.67 128.0 -2.18 -0.60 24.9 85 8 9 5 2 2 0 0  DT 28 T DA 29 T 15 2.26 2.23 142.2 -1.82 -0.56 22.8 84 9 6 4 4 1 0 0  DT 5 N A 1 R G 4 R A 5 R G 6 R A 7 R DC 12 T DA 13 T DG 14 T DA 15 T DG 17 T DA 18 T DT 24 T DC 25 T DG 26 T DA 27 T DT 28 T 16 2.77 2.77 150.2 -1.77 -0.48 23.0 84 11 9 6 6 1 1 0  DC 1 N A 1 R G 4 R A 5 R G 6 R A 7 R DA 9 T DA 10 T DG 17 T DA 18 T DT 24 T DC 25 T DG 26 T DA 27 T DT 28 T 17 1.86 2.04 169.5 -1.41 -0.41 19.0 83 14 9 10 7 3 3 0  DC 1 N A 1 R G 4 R A 5 R G 6 R A 7 R C 13 R DG 17 T DA 18 T DT 24 T DC 25 T DG 26 T DA 27 T DT 28 T 18 2.14 2.13 181.0 -1.25 -0.38 17.3 88 13 7 11 8 1 2 0  A 1 R G 4 R A 5 R G 6 R A 7 R DG 17 T DA 18 T DT 24 T DC 25 T DG 26 T DA 27 T DT 28 T 19 1.56 1.75 187.6 -1.70 -0.47 23.2 86 18 15 12 9 1 3 0  DC 1 N 20 2.00 2.69 187.3 -1.34 -0.35 20.0 86 19 9 12 11 4 4 0  DC 1 N 21 2.03 2.30 186.4 -0.80 -0.11 13.3 80 9 8 8 13 5 3 0   22 1.82 2.16 199.5 -1.39 -0.37 19.9 80 11 11 6 13 3 3 0   23 2.73 2.74 198.4 -2.33 -0.58 28.8 83 21 11 7 6 1 5 0  DC 1 N DG 10 N A 1 R G 4 R A 5 R G 6 R A 7 R DA 9 T DA 10 T DG 17 T DA 18 T DT 24 T DC 25 T 24 2.68 2.68 206.9 -1.94 -0.47 27.6 81 18 13 7 9 6 2 0   25 1.29 1.48 210.8 -1.71 -0.36 19.5 81 15 15 12 10 4 3 0   26 2.18 2.21 253.6 -1.84 -0.36 22.3 84 25 14 13 12 4 4 0  A 1 R DC 25 T DG 26 T DA 27 T DT 28 T 27 2.18 2.20 263.2 -2.16 -0.41 26.1 83 26 16 12 10 5 3 0   28 2.11 2.75 258.2 -2.01 -0.53 25.1 84 18 16 15 11 1 3 0   29 2.16 2.41 276.0 -1.50 -0.43 19.2 84 16 15 17 18 5 5 0   30 2.13 2.28 273.9 -1.93 -0.44 24.3 84 28 18 15 14 3 5 0  DC 1 N A 1 R G 4 R A 5 R G 6 R A 7 R DA 9 T DA 10 T DG 17 T DA 18 T DT 24 T DC 25 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.