PDBsum entry 3gpt Go to PDB code:  Pore analysis for: 3gpt calculated with MOLE 2.0 PDB id 3gpt Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 2.11 47.9 -0.45 -0.18 13.0 86 6 3 4 8 1 1 0   2 1.56 1.69 105.6 -2.73 -0.46 32.0 80 17 9 7 5 6 1 0   3 1.67 2.48 138.9 -2.11 -0.49 26.2 84 14 10 9 7 1 0 0   4 1.46 1.51 151.3 -2.26 -0.44 26.2 83 19 13 12 10 6 1 0   5 1.56 2.26 160.3 -1.21 -0.17 17.6 76 18 9 11 12 11 3 1   6 1.37 1.38 173.4 -1.96 -0.35 23.5 82 19 14 11 12 6 2 0   7 1.49 2.21 174.8 -2.13 -0.39 22.8 82 21 9 13 9 6 1 1   8 1.75 2.90 185.5 -1.84 -0.33 24.6 76 22 13 10 11 9 3 0   9 1.25 1.37 192.4 -1.98 -0.53 23.7 83 15 17 13 9 4 1 0   10 1.45 1.51 193.6 -1.40 -0.25 19.1 79 20 13 13 16 9 2 0   11 1.56 1.69 200.1 -2.71 -0.54 29.6 82 25 13 12 8 4 1 0   12 1.54 1.69 203.1 -2.38 -0.52 29.5 79 16 20 9 7 7 2 0   13 1.38 1.36 210.3 -2.27 -0.45 24.0 84 23 13 16 13 5 0 0   14 1.43 1.55 221.8 -1.94 -0.38 20.6 83 22 14 19 14 8 1 1   15 1.55 3.20 228.9 -2.02 -0.43 25.1 79 17 23 13 9 10 2 0   16 1.64 2.90 234.3 -2.01 -0.41 24.4 79 24 16 15 11 10 2 0   17 1.49 1.53 230.9 -1.87 -0.29 22.0 79 26 9 14 12 10 3 0   18 1.63 2.90 236.1 -1.33 -0.22 17.3 81 20 8 17 13 11 4 2  GPT 224 H 19 1.39 2.42 242.9 -1.57 -0.23 18.1 79 25 10 16 13 12 3 0   20 1.67 2.90 244.6 -1.90 -0.28 22.0 79 25 10 17 10 13 3 0   21 2.17 2.37 265.6 -2.31 -0.46 27.6 80 22 21 13 9 10 3 0   22 1.19 1.17 283.4 -1.86 -0.41 21.3 84 21 19 19 18 7 3 0  GPT 224 H 23 1.49 1.59 273.0 -1.73 -0.30 20.4 81 26 14 20 17 12 2 0   24 1.09 1.64 291.7 -1.42 -0.33 18.5 81 22 13 17 19 10 3 0  GPT 224 Y 25 1.60 3.10 299.0 -1.47 -0.19 19.0 77 28 11 18 15 16 4 0   26 1.39 2.04 313.8 -2.15 -0.45 23.6 81 25 22 21 11 12 2 1   27 1.17 1.51 330.3 -1.23 -0.18 16.8 80 27 14 23 24 15 5 0   28 1.54 1.56 349.3 -2.24 -0.50 24.5 83 27 26 24 15 10 1 0   29 1.85 2.91 363.7 -1.95 -0.38 22.7 79 27 21 22 14 16 3 0   30 1.13 1.57 375.4 -2.08 -0.49 24.0 82 23 27 21 15 11 4 0  GPT 224 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.