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PDBsum entry 3gly

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Tunnel analysis for: 3gly calculated with MOLE 2.0 PDB id
3gly
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.53 9.5 -1.50 -0.59 15.5 83 1 2 3 2 1 0 0  
2 1.86 6.9 -0.81 -0.59 17.1 86 0 2 1 1 1 0 0  
3 1.79 8.8 -1.37 -0.66 21.5 78 1 3 0 1 1 0 0  
4 2.07 5.4 -0.01 -0.44 10.7 93 0 1 1 3 0 1 0  
5 2.12 5.8 -0.12 -0.30 8.0 80 1 0 1 1 0 1 0  486 MAN A
6 2.10 7.2 -0.32 -0.20 11.0 81 1 1 0 3 0 1 0  
7 1.43 6.7 -0.65 -0.17 10.4 77 1 1 0 1 1 0 0  
8 1.40 9.0 -0.06 -0.34 3.7 78 1 0 1 2 1 0 0  
9 1.35 7.8 -0.62 -0.70 2.9 88 0 0 2 3 0 0 0  492 MAN A
10 1.44 8.5 -0.52 -0.60 2.6 81 0 0 2 3 0 0 0  492 MAN A
11 1.40 3.8 -2.03 -0.69 17.4 102 1 0 2 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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